All infants have an "open gut" (it benefits their immune system), which is the reason for the recommendation to avoid giving them anything but breast milk for the first 6 months, and common allergens for at least a year.
Food allergies can cause skin reactions, and can also cause skin reactions in the intestines. The damage from that can cause the leaky gut.
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Crying won't help you, praying won't do you no good.
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